Cluster: Rep_1885_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1885
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1885_c_42 | Rep_1885_c_42_53 | 63029 | 64345 | + | 2.A.3.2.1 |
| pfam | Rep_1885_c_42 | Rep_1885_c_42_54 | 64605 | 65555 | + | Cation_efflux |
| TC | Rep_1885_c_42 | Rep_1885_c_42_55 | 65581 | 66171 | + | 9.B.27.2.5 |
| CAZyme | Rep_1885_c_42 | Rep_1885_c_42_56 | 66182 | 67783 | + | GT83 |
Gene ID: Rep_1885_c_42_53
Type: TC
Location: 63029 - 64345 (+)
Type: TC
Location: 63029 - 64345 (+)
Gene ID: Rep_1885_c_42_54
Type: pfam
Location: 64605 - 65555 (+)
Type: pfam
Location: 64605 - 65555 (+)
Gene ID: Rep_1885_c_42_55
Type: TC
Location: 65581 - 66171 (+)
Type: TC
Location: 65581 - 66171 (+)
Gene ID: Rep_1885_c_42_56
Type: CAZyme
Location: 66182 - 67783 (+)
Type: CAZyme
Location: 66182 - 67783 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
F0422
Species
F0422 sp003999875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.