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Cluster: Rep_1885_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1885_c_20 Rep_1885_c_20_432 470505 472634 - 3.A.3.32.3
pfam Rep_1885_c_20 Rep_1885_c_20_433 472638 472898 - DUF6110
pfam Rep_1885_c_20 Rep_1885_c_20_434 473025 473225 - FeoB_associated
TC Rep_1885_c_20 Rep_1885_c_20_435 473354 475756 - 9.A.8.1.6
STP Rep_1885_c_20 Rep_1885_c_20_436 475771 476001 - FeoA
TC Rep_1885_c_20 Rep_1885_c_20_437 476432 477730 + 1.I.1.1.3
pfam Rep_1885_c_20 Rep_1885_c_20_438 477922 480288 - Topoisom_bac | Zn_ribbon_Top1 | Toprim
sulfatase Rep_1885_c_20 Rep_1885_c_20_439 480819 482408 + S1_97
CAZyme Rep_1885_c_20 Rep_1885_c_20_440 482648 483484 - CE4
TC Rep_1885_c_20 Rep_1885_c_20_441 483934 485178 + 2.A.27.1.3
Gene ID: Rep_1885_c_20_432
Type: TC
Location: 470505 - 472634 (-)
Gene ID: Rep_1885_c_20_433
Type: pfam
Location: 472638 - 472898 (-)
Gene ID: Rep_1885_c_20_434
Type: pfam
Location: 473025 - 473225 (-)
Gene ID: Rep_1885_c_20_435
Type: TC
Location: 473354 - 475756 (-)
Gene ID: Rep_1885_c_20_436
Type: STP
Location: 475771 - 476001 (-)
Gene ID: Rep_1885_c_20_437
Type: TC
Location: 476432 - 477730 (+)
Gene ID: Rep_1885_c_20_438
Type: pfam
Location: 477922 - 480288 (-)
Gene ID: Rep_1885_c_20_439
Type: sulfatase
Location: 480819 - 482408 (+)
Gene ID: Rep_1885_c_20_440
Type: CAZyme
Location: 482648 - 483484 (-)
Gene ID: Rep_1885_c_20_441
Type: TC
Location: 483934 - 485178 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Veillonellales
→
Family
Veillonellaceae
→
Genus
F0422
→
Species
F0422 sp003999875

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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