Cluster: Rep_1885_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1885
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1885_c_20 | Rep_1885_c_20_328 | 347178 | 348284 | - | GT28 |
| pfam | Rep_1885_c_20 | Rep_1885_c_20_329 | 348295 | 349647 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_1885_c_20 | Rep_1885_c_20_330 | 349709 | 350671 | - | 9.B.146.1.6 |
Gene ID: Rep_1885_c_20_328
Type: CAZyme
Location: 347178 - 348284 (-)
Type: CAZyme
Location: 347178 - 348284 (-)
Gene ID: Rep_1885_c_20_329
Type: pfam
Location: 348295 - 349647 (-)
Type: pfam
Location: 348295 - 349647 (-)
Gene ID: Rep_1885_c_20_330
Type: TC
Location: 349709 - 350671 (-)
Type: TC
Location: 349709 - 350671 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
F0422
Species
F0422 sp003999875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.