Cluster: Rep_1885_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1885
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1885_c_13 | Rep_1885_c_13_3 | 4298 | 5842 | + | 2.A.66.2.14 |
| pfam | Rep_1885_c_13 | Rep_1885_c_13_4 | 5839 | 6642 | + | MazG | MazG |
| pfam | Rep_1885_c_13 | Rep_1885_c_13_5 | 6677 | 6976 | + | Bac_DNA_binding |
| CAZyme | Rep_1885_c_13 | Rep_1885_c_13_6 | 7155 | 8270 | + | GT28 |
Gene ID: Rep_1885_c_13_3
Type: TC
Location: 4298 - 5842 (+)
Type: TC
Location: 4298 - 5842 (+)
Gene ID: Rep_1885_c_13_4
Type: pfam
Location: 5839 - 6642 (+)
Type: pfam
Location: 5839 - 6642 (+)
Gene ID: Rep_1885_c_13_5
Type: pfam
Location: 6677 - 6976 (+)
Type: pfam
Location: 6677 - 6976 (+)
Gene ID: Rep_1885_c_13_6
Type: CAZyme
Location: 7155 - 8270 (+)
Type: CAZyme
Location: 7155 - 8270 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
F0422
Species
F0422 sp003999875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.