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Cluster: Rep_1876_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1876_c_93 Rep_1876_c_93_1 1 570 + 9.A.5.4.2
TC Rep_1876_c_93 Rep_1876_c_93_2 583 1071 + 9.B.156.1.1
peptidase Rep_1876_c_93 Rep_1876_c_93_3 1118 2308 + M38.UPW
TC Rep_1876_c_93 Rep_1876_c_93_4 2473 3735 + 2.A.23.1.2
CAZyme Rep_1876_c_93 Rep_1876_c_93_5 3858 5495 + GH36
TF Rep_1876_c_93 Rep_1876_c_93_6 5492 6340 - HTH_AraC | HTH_AraC
STP Rep_1876_c_93 Rep_1876_c_93_7 6552 6908 + Sigma70_r4
TC Rep_1876_c_93 Rep_1876_c_93_8 6911 8281 + 3.A.5.1.1
Gene ID: Rep_1876_c_93_1
Type: TC
Location: 1 - 570 (+)
Gene ID: Rep_1876_c_93_2
Type: TC
Location: 583 - 1071 (+)
Gene ID: Rep_1876_c_93_3
Type: peptidase
Location: 1118 - 2308 (+)
Gene ID: Rep_1876_c_93_4
Type: TC
Location: 2473 - 3735 (+)
Gene ID: Rep_1876_c_93_5
Type: CAZyme
Location: 3858 - 5495 (+)
Gene ID: Rep_1876_c_93_6
Type: TF
Location: 5492 - 6340 (-)
Gene ID: Rep_1876_c_93_7
Type: STP
Location: 6552 - 6908 (+)
Gene ID: Rep_1876_c_93_8
Type: TC
Location: 6911 - 8281 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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