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Cluster: Rep_1876_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1876_c_82 Rep_1876_c_82_17 16680 18014 + 4.A.3.2.8
TC Rep_1876_c_82 Rep_1876_c_82_18 18092 19600 + 1.B.23.1.3
TC Rep_1876_c_82 Rep_1876_c_82_19 19635 19937 + 4.A.3.2.4
TC Rep_1876_c_82 Rep_1876_c_82_20 19945 20268 + 4.A.3.2.8
CAZyme Rep_1876_c_82 Rep_1876_c_82_21 20270 21691 + GH1
CAZyme Rep_1876_c_82 Rep_1876_c_82_22 21713 22498 + GH16_21
CAZyme Rep_1876_c_82 Rep_1876_c_82_23 22513 24312 + GH9
Gene ID: Rep_1876_c_82_17
Type: TC
Location: 16680 - 18014 (+)
Gene ID: Rep_1876_c_82_18
Type: TC
Location: 18092 - 19600 (+)
Gene ID: Rep_1876_c_82_19
Type: TC
Location: 19635 - 19937 (+)
Gene ID: Rep_1876_c_82_20
Type: TC
Location: 19945 - 20268 (+)
Gene ID: Rep_1876_c_82_21
Type: CAZyme
Location: 20270 - 21691 (+)
Gene ID: Rep_1876_c_82_22
Type: CAZyme
Location: 21713 - 22498 (+)
Gene ID: Rep_1876_c_82_23
Type: CAZyme
Location: 22513 - 24312 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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