Cluster: Rep_1876_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1876
- CGC Family ID: CGCFAM_02223
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1876_c_188 | Rep_1876_c_188_1 | 36 | 2111 | - | GH3 |
| pfam | Rep_1876_c_188 | Rep_1876_c_188_2 | 2443 | 5289 | - | UvrA_DNA-bind | UvrA_inter |
| TC | Rep_1876_c_188 | Rep_1876_c_188_3 | 5350 | 6303 | - | 3.A.1.5.20 |
| TC | Rep_1876_c_188 | Rep_1876_c_188_4 | 6303 | 7289 | - | 3.A.1.5.2 |
| TC | Rep_1876_c_188 | Rep_1876_c_188_5 | 7304 | 8212 | - | 3.A.1.5.2 |
| TC | Rep_1876_c_188 | Rep_1876_c_188_6 | 8215 | 9147 | - | 3.A.1.5.2 |
Gene ID: Rep_1876_c_188_1
Type: CAZyme
Location: 36 - 2111 (-)
Type: CAZyme
Location: 36 - 2111 (-)
Gene ID: Rep_1876_c_188_2
Type: pfam
Location: 2443 - 5289 (-)
Type: pfam
Location: 2443 - 5289 (-)
Gene ID: Rep_1876_c_188_3
Type: TC
Location: 5350 - 6303 (-)
Type: TC
Location: 5350 - 6303 (-)
Gene ID: Rep_1876_c_188_4
Type: TC
Location: 6303 - 7289 (-)
Type: TC
Location: 6303 - 7289 (-)
Gene ID: Rep_1876_c_188_5
Type: TC
Location: 7304 - 8212 (-)
Type: TC
Location: 7304 - 8212 (-)
Gene ID: Rep_1876_c_188_6
Type: TC
Location: 8215 - 9147 (-)
Type: TC
Location: 8215 - 9147 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Species
Megamonas hypermegale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.