Cluster: Rep_1876_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1876
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1876_c_177 | Rep_1876_c_177_22 | 25422 | 26723 | + | 2.A.40.7.2 |
| CAZyme | Rep_1876_c_177 | Rep_1876_c_177_23 | 26755 | 27564 | + | GH73 |
| NULL(UNKNOWN) | Rep_1876_c_177 | Rep_1876_c_177_24 | 27644 | 28153 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1876_c_177 | Rep_1876_c_177_25 | 28175 | 28732 | - | DUF805 | Zn_Ribbon_1 | Zn_ribbon_3 |
| CAZyme | Rep_1876_c_177 | Rep_1876_c_177_26 | 28760 | 29920 | - | GH3 |
Gene ID: Rep_1876_c_177_22
Type: TC
Location: 25422 - 26723 (+)
Type: TC
Location: 25422 - 26723 (+)
Gene ID: Rep_1876_c_177_23
Type: CAZyme
Location: 26755 - 27564 (+)
Type: CAZyme
Location: 26755 - 27564 (+)
Gene ID: Rep_1876_c_177_24
Type:
Location: 27644 - 28153 (-)
Type:
Location: 27644 - 28153 (-)
Gene ID: Rep_1876_c_177_25
Type: pfam
Location: 28175 - 28732 (-)
Type: pfam
Location: 28175 - 28732 (-)
Gene ID: Rep_1876_c_177_26
Type: CAZyme
Location: 28760 - 29920 (-)
Type: CAZyme
Location: 28760 - 29920 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Species
Megamonas hypermegale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.