Cluster: Rep_1876_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1876
- CGC Family ID: CGCFAM_04112
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1876_c_161 | Rep_1876_c_161_3 | 1621 | 3297 | + | GH13_31 |
| pfam | Rep_1876_c_161 | Rep_1876_c_161_4 | 3341 | 4237 | - | ADP_ribosyl_GH |
| TC | Rep_1876_c_161 | Rep_1876_c_161_5 | 4259 | 4981 | - | 9.B.120.1.2 |
Gene ID: Rep_1876_c_161_3
Type: CAZyme
Location: 1621 - 3297 (+)
Type: CAZyme
Location: 1621 - 3297 (+)
Gene ID: Rep_1876_c_161_4
Type: pfam
Location: 3341 - 4237 (-)
Type: pfam
Location: 3341 - 4237 (-)
Gene ID: Rep_1876_c_161_5
Type: TC
Location: 4259 - 4981 (-)
Type: TC
Location: 4259 - 4981 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Megamonas
Species
Megamonas hypermegale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.