Cluster: Rep_1868_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1868
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1868_c_50 | Rep_1868_c_50_7 | 4780 | 5781 | + | 4.D.2.1.4 |
| pfam | Rep_1868_c_50 | Rep_1868_c_50_8 | 5781 | 6716 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | Rep_1868_c_50 | Rep_1868_c_50_9 | 6716 | 8266 | + | GT83 |
Gene ID: Rep_1868_c_50_7
Type: TC
Location: 4780 - 5781 (+)
Type: TC
Location: 4780 - 5781 (+)
Gene ID: Rep_1868_c_50_8
Type: pfam
Location: 5781 - 6716 (+)
Type: pfam
Location: 5781 - 6716 (+)
Gene ID: Rep_1868_c_50_9
Type: CAZyme
Location: 6716 - 8266 (+)
Type: CAZyme
Location: 6716 - 8266 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
CAG-266
Species
CAG-266 sp900554395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.