Cluster: Rep_1863_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1863
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1863_c_1 | Rep_1863_c_1_35 | 37929 | 38753 | + | GT51 |
| pfam | Rep_1863_c_1 | Rep_1863_c_1_36 | 38886 | 40382 | - | Lyase_1 | ASL_C2 |
| peptidase | Rep_1863_c_1 | Rep_1863_c_1_37 | 40545 | 41780 | - | M20.UPW |
| TC | Rep_1863_c_1 | Rep_1863_c_1_38 | 41956 | 43206 | + | 2.A.40.1.1 |
Gene ID: Rep_1863_c_1_35
Type: CAZyme
Location: 37929 - 38753 (+)
Type: CAZyme
Location: 37929 - 38753 (+)
Gene ID: Rep_1863_c_1_36
Type: pfam
Location: 38886 - 40382 (-)
Type: pfam
Location: 38886 - 40382 (-)
Gene ID: Rep_1863_c_1_37
Type: peptidase
Location: 40545 - 41780 (-)
Type: peptidase
Location: 40545 - 41780 (-)
Gene ID: Rep_1863_c_1_38
Type: TC
Location: 41956 - 43206 (+)
Type: TC
Location: 41956 - 43206 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.