Cluster: Rep_1863_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1863
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1863_c_1 | Rep_1863_c_1_11 | 10229 | 11332 | - | GT28 |
| pfam | Rep_1863_c_1 | Rep_1863_c_1_12 | 11349 | 12707 | - | Mur_ligase_C | Mur_ligase_M |
| TC | Rep_1863_c_1 | Rep_1863_c_1_13 | 12720 | 13682 | - | 9.B.146.1.6 |
Gene ID: Rep_1863_c_1_11
Type: CAZyme
Location: 10229 - 11332 (-)
Type: CAZyme
Location: 10229 - 11332 (-)
Gene ID: Rep_1863_c_1_12
Type: pfam
Location: 11349 - 12707 (-)
Type: pfam
Location: 11349 - 12707 (-)
Gene ID: Rep_1863_c_1_13
Type: TC
Location: 12720 - 13682 (-)
Type: TC
Location: 12720 - 13682 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.