Cluster: Rep_1863_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1863
- CGC Family ID: CGCFAM_00188
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1863_c_64 | Rep_1863_c_64_5 | 4000 | 4668 | - | 3.A.7.13.2 |
| CAZyme | Rep_1863_c_64 | Rep_1863_c_64_6 | 4767 | 5828 | - | GT2 |
| TC | Rep_1863_c_64 | Rep_1863_c_64_7 | 6585 | 7502 | - | 3.A.5.1.1 |
Gene ID: Rep_1863_c_64_5
Type: TC
Location: 4000 - 4668 (-)
Type: TC
Location: 4000 - 4668 (-)
Gene ID: Rep_1863_c_64_6
Type: CAZyme
Location: 4767 - 5828 (-)
Type: CAZyme
Location: 4767 - 5828 (-)
Gene ID: Rep_1863_c_64_7
Type: TC
Location: 6585 - 7502 (-)
Type: TC
Location: 6585 - 7502 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.