Cluster: Rep_1863_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1863
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1863_c_52 | Rep_1863_c_52_7 | 5020 | 5766 | + | 1.B.48.1.3 |
| CAZyme | Rep_1863_c_52 | Rep_1863_c_52_8 | 5791 | 7608 | + | CBM13 |
| NULL(UNKNOWN) | Rep_1863_c_52 | Rep_1863_c_52_9 | 7630 | 8514 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1863_c_52 | Rep_1863_c_52_10 | 9027 | 10055 | - | 2.A.98.1.4 |
| CAZyme | Rep_1863_c_52 | Rep_1863_c_52_11 | 10257 | 11660 | + | AA4 |
Gene ID: Rep_1863_c_52_7
Type: TC
Location: 5020 - 5766 (+)
Type: TC
Location: 5020 - 5766 (+)
Gene ID: Rep_1863_c_52_8
Type: CAZyme
Location: 5791 - 7608 (+)
Type: CAZyme
Location: 5791 - 7608 (+)
Gene ID: Rep_1863_c_52_9
Type:
Location: 7630 - 8514 (+)
Type:
Location: 7630 - 8514 (+)
Gene ID: Rep_1863_c_52_10
Type: TC
Location: 9027 - 10055 (-)
Type: TC
Location: 9027 - 10055 (-)
Gene ID: Rep_1863_c_52_11
Type: CAZyme
Location: 10257 - 11660 (+)
Type: CAZyme
Location: 10257 - 11660 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.