Cluster: Rep_1863_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1863
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1863_c_42 | Rep_1863_c_42_5 | 4303 | 5553 | + | 2.A.16.2.2 |
| pfam | Rep_1863_c_42 | Rep_1863_c_42_6 | 5595 | 6269 | - | Lactamase_B | Lactamase_B_2 | Lactamase_B_3 |
| CAZyme | Rep_1863_c_42 | Rep_1863_c_42_7 | 6442 | 7413 | + | GH73 |
| pfam | Rep_1863_c_42 | Rep_1863_c_42_8 | 7447 | 7929 | + | SpoU_methylase |
| pfam | Rep_1863_c_42 | Rep_1863_c_42_9 | 7926 | 8288 | + | PTPS |
| TC | Rep_1863_c_42 | Rep_1863_c_42_10 | 8285 | 9052 | + | 9.B.10.1.1 |
Gene ID: Rep_1863_c_42_5
Type: TC
Location: 4303 - 5553 (+)
Type: TC
Location: 4303 - 5553 (+)
Gene ID: Rep_1863_c_42_6
Type: pfam
Location: 5595 - 6269 (-)
Type: pfam
Location: 5595 - 6269 (-)
Gene ID: Rep_1863_c_42_7
Type: CAZyme
Location: 6442 - 7413 (+)
Type: CAZyme
Location: 6442 - 7413 (+)
Gene ID: Rep_1863_c_42_8
Type: pfam
Location: 7447 - 7929 (+)
Type: pfam
Location: 7447 - 7929 (+)
Gene ID: Rep_1863_c_42_9
Type: pfam
Location: 7926 - 8288 (+)
Type: pfam
Location: 7926 - 8288 (+)
Gene ID: Rep_1863_c_42_10
Type: TC
Location: 8285 - 9052 (+)
Type: TC
Location: 8285 - 9052 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.