Cluster: Rep_1863_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1863
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1863_c_30 | Rep_1863_c_30_2 | 895 | 1920 | + | 4.D.2.1.4 |
| pfam | Rep_1863_c_30 | Rep_1863_c_30_3 | 1987 | 2904 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | Rep_1863_c_30 | Rep_1863_c_30_4 | 2950 | 4509 | + | GT83 |
Gene ID: Rep_1863_c_30_2
Type: TC
Location: 895 - 1920 (+)
Type: TC
Location: 895 - 1920 (+)
Gene ID: Rep_1863_c_30_3
Type: pfam
Location: 1987 - 2904 (+)
Type: pfam
Location: 1987 - 2904 (+)
Gene ID: Rep_1863_c_30_4
Type: CAZyme
Location: 2950 - 4509 (+)
Type: CAZyme
Location: 2950 - 4509 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.