Cluster: Rep_1858_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1858
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1858_c_4 | Rep_1858_c_4_126 | 110902 | 112005 | - | GT28 |
| pfam | Rep_1858_c_4 | Rep_1858_c_4_127 | 112002 | 113375 | - | Mur_ligase_C | Mur_ligase_M |
| TC | Rep_1858_c_4 | Rep_1858_c_4_128 | 113463 | 114425 | - | 9.B.146.1.6 |
Gene ID: Rep_1858_c_4_126
Type: CAZyme
Location: 110902 - 112005 (-)
Type: CAZyme
Location: 110902 - 112005 (-)
Gene ID: Rep_1858_c_4_127
Type: pfam
Location: 112002 - 113375 (-)
Type: pfam
Location: 112002 - 113375 (-)
Gene ID: Rep_1858_c_4_128
Type: TC
Location: 113463 - 114425 (-)
Type: TC
Location: 113463 - 114425 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.