Cluster: Rep_1858_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1858
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1858_c_1 | Rep_1858_c_1_159 | 164394 | 165437 | + | GT9 |
| CAZyme | Rep_1858_c_1 | Rep_1858_c_1_160 | 165437 | 166483 | + | GT9 |
| NULL(UNKNOWN) | Rep_1858_c_1 | Rep_1858_c_1_161 | 166485 | 167129 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1858_c_1 | Rep_1858_c_1_162 | 167284 | 168687 | + | 2.A.25.1.5 |
Gene ID: Rep_1858_c_1_159
Type: CAZyme
Location: 164394 - 165437 (+)
Type: CAZyme
Location: 164394 - 165437 (+)
Gene ID: Rep_1858_c_1_160
Type: CAZyme
Location: 165437 - 166483 (+)
Type: CAZyme
Location: 165437 - 166483 (+)
Gene ID: Rep_1858_c_1_161
Type:
Location: 166485 - 167129 (+)
Type:
Location: 166485 - 167129 (+)
Gene ID: Rep_1858_c_1_162
Type: TC
Location: 167284 - 168687 (+)
Type: TC
Location: 167284 - 168687 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.