Cluster: Rep_1858_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1858
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1858_c_0 | Rep_1858_c_0_240 | 257827 | 258963 | + | GT19 |
| TC | Rep_1858_c_0 | Rep_1858_c_0_241 | 258960 | 260693 | + | 3.A.1.106.3 |
| CAZyme | Rep_1858_c_0 | Rep_1858_c_0_242 | 260713 | 263244 | + | GT30 |
Gene ID: Rep_1858_c_0_240
Type: CAZyme
Location: 257827 - 258963 (+)
Type: CAZyme
Location: 257827 - 258963 (+)
Gene ID: Rep_1858_c_0_241
Type: TC
Location: 258960 - 260693 (+)
Type: TC
Location: 258960 - 260693 (+)
Gene ID: Rep_1858_c_0_242
Type: CAZyme
Location: 260713 - 263244 (+)
Type: CAZyme
Location: 260713 - 263244 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.