Cluster: Rep_1858_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1858
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1858_c_0 | Rep_1858_c_0_100 | 108010 | 109569 | - | 2.A.25.1.5 |
| CAZyme | Rep_1858_c_0 | Rep_1858_c_0_101 | 109863 | 111269 | + | AA4 |
| CAZyme | Rep_1858_c_0 | Rep_1858_c_0_102 | 111451 | 112851 | + | AA4 |
| CAZyme | Rep_1858_c_0 | Rep_1858_c_0_103 | 112927 | 114324 | + | AA4 |
Gene ID: Rep_1858_c_0_100
Type: TC
Location: 108010 - 109569 (-)
Type: TC
Location: 108010 - 109569 (-)
Gene ID: Rep_1858_c_0_101
Type: CAZyme
Location: 109863 - 111269 (+)
Type: CAZyme
Location: 109863 - 111269 (+)
Gene ID: Rep_1858_c_0_102
Type: CAZyme
Location: 111451 - 112851 (+)
Type: CAZyme
Location: 111451 - 112851 (+)
Gene ID: Rep_1858_c_0_103
Type: CAZyme
Location: 112927 - 114324 (+)
Type: CAZyme
Location: 112927 - 114324 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.