Cluster: Rep_1858_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1858
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1858_c_29 | Rep_1858_c_29_1 | 153 | 1403 | + | 2.A.16.2.2 |
| pfam | Rep_1858_c_29 | Rep_1858_c_29_2 | 1407 | 2078 | - | Lactamase_B | Lactamase_B_2 | Lactamase_B_3 |
| CAZyme | Rep_1858_c_29 | Rep_1858_c_29_3 | 2277 | 3224 | + | GH73 |
| pfam | Rep_1858_c_29 | Rep_1858_c_29_4 | 3268 | 3747 | + | SpoU_methylase |
| pfam | Rep_1858_c_29 | Rep_1858_c_29_5 | 3744 | 4100 | + | PTPS |
| TC | Rep_1858_c_29 | Rep_1858_c_29_6 | 4102 | 4878 | + | 9.B.10.1.1 |
Gene ID: Rep_1858_c_29_1
Type: TC
Location: 153 - 1403 (+)
Type: TC
Location: 153 - 1403 (+)
Gene ID: Rep_1858_c_29_2
Type: pfam
Location: 1407 - 2078 (-)
Type: pfam
Location: 1407 - 2078 (-)
Gene ID: Rep_1858_c_29_3
Type: CAZyme
Location: 2277 - 3224 (+)
Type: CAZyme
Location: 2277 - 3224 (+)
Gene ID: Rep_1858_c_29_4
Type: pfam
Location: 3268 - 3747 (+)
Type: pfam
Location: 3268 - 3747 (+)
Gene ID: Rep_1858_c_29_5
Type: pfam
Location: 3744 - 4100 (+)
Type: pfam
Location: 3744 - 4100 (+)
Gene ID: Rep_1858_c_29_6
Type: TC
Location: 4102 - 4878 (+)
Type: TC
Location: 4102 - 4878 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.