Cluster: Rep_1858_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1858
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1858_c_28 | Rep_1858_c_28_7 | 4737 | 5960 | - | GH171 |
| pfam | Rep_1858_c_28 | Rep_1858_c_28_8 | 6113 | 6460 | - | Glutaredoxin | ArsC |
| TC | Rep_1858_c_28 | Rep_1858_c_28_9 | 6473 | 7627 | - | 9.B.174.1.1 |
| STP | Rep_1858_c_28 | Rep_1858_c_28_10 | 7652 | 8797 | - | Peptidase_M23 |
| pfam | Rep_1858_c_28 | Rep_1858_c_28_11 | 8812 | 9705 | - | FtsX | FtsX_ECD |
| TC | Rep_1858_c_28 | Rep_1858_c_28_12 | 9689 | 10375 | - | 3.A.1.140.1 |
Gene ID: Rep_1858_c_28_7
Type: CAZyme
Location: 4737 - 5960 (-)
Type: CAZyme
Location: 4737 - 5960 (-)
Gene ID: Rep_1858_c_28_8
Type: pfam
Location: 6113 - 6460 (-)
Type: pfam
Location: 6113 - 6460 (-)
Gene ID: Rep_1858_c_28_9
Type: TC
Location: 6473 - 7627 (-)
Type: TC
Location: 6473 - 7627 (-)
Gene ID: Rep_1858_c_28_10
Type: STP
Location: 7652 - 8797 (-)
Type: STP
Location: 7652 - 8797 (-)
Gene ID: Rep_1858_c_28_11
Type: pfam
Location: 8812 - 9705 (-)
Type: pfam
Location: 8812 - 9705 (-)
Gene ID: Rep_1858_c_28_12
Type: TC
Location: 9689 - 10375 (-)
Type: TC
Location: 9689 - 10375 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.