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Cluster: Rep_184_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_184_c_0 Rep_184_c_0_664 853426 854541 + GH5_38
CAZyme Rep_184_c_0 Rep_184_c_0_665 854571 857063 + GH94
TC Rep_184_c_0 Rep_184_c_0_666 857102 858469 + 2.A.2.3.6
CAZyme Rep_184_c_0 Rep_184_c_0_667 858682 859881 + GH5_4
TC Rep_184_c_0 Rep_184_c_0_668 860160 863339 + 1.B.14.6.2
TC Rep_184_c_0 Rep_184_c_0_669 863354 865105 + 8.A.46.2.2
NULL(UNKNOWN) Rep_184_c_0 Rep_184_c_0_670 865123 866115 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_184_c_0 Rep_184_c_0_671 866085 866213 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_184_c_0 Rep_184_c_0_672 866235 868520 + GH3
CAZyme Rep_184_c_0 Rep_184_c_0_673 868532 870901 + GH3
CAZyme Rep_184_c_0 Rep_184_c_0_674 870913 872928 + GH51_2
STP Rep_184_c_0 Rep_184_c_0_675 873229 875547 + HATPase_c | HisKA | Response_reg
TC Rep_184_c_0 Rep_184_c_0_676 875535 876806 + 3.A.23.1.1
pfam Rep_184_c_0 Rep_184_c_0_677 876970 877557 + Cytidylate_kin2
TC Rep_184_c_0 Rep_184_c_0_678 877559 877915 + 1.E.14.1.15
TC Rep_184_c_0 Rep_184_c_0_679 877912 878607 + 2.A.122.1.6
Gene ID: Rep_184_c_0_664
Type: CAZyme
Location: 853426 - 854541 (+)
Gene ID: Rep_184_c_0_665
Type: CAZyme
Location: 854571 - 857063 (+)
Gene ID: Rep_184_c_0_666
Type: TC
Location: 857102 - 858469 (+)
Gene ID: Rep_184_c_0_667
Type: CAZyme
Location: 858682 - 859881 (+)
Gene ID: Rep_184_c_0_668
Type: TC
Location: 860160 - 863339 (+)
Gene ID: Rep_184_c_0_669
Type: TC
Location: 863354 - 865105 (+)
Gene ID: Rep_184_c_0_670
Type:
Location: 865123 - 866115 (+)
Gene ID: Rep_184_c_0_671
Type:
Location: 866085 - 866213 (-)
Gene ID: Rep_184_c_0_672
Type: CAZyme
Location: 866235 - 868520 (+)
Gene ID: Rep_184_c_0_673
Type: CAZyme
Location: 868532 - 870901 (+)
Gene ID: Rep_184_c_0_674
Type: CAZyme
Location: 870913 - 872928 (+)
Gene ID: Rep_184_c_0_675
Type: STP
Location: 873229 - 875547 (+)
Gene ID: Rep_184_c_0_676
Type: TC
Location: 875535 - 876806 (+)
Gene ID: Rep_184_c_0_677
Type: pfam
Location: 876970 - 877557 (+)
Gene ID: Rep_184_c_0_678
Type: TC
Location: 877559 - 877915 (+)
Gene ID: Rep_184_c_0_679
Type: TC
Location: 877912 - 878607 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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