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Cluster: Rep_184_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_184_c_0 Rep_184_c_0_610 765917 767326 - CE20
CAZyme Rep_184_c_0 Rep_184_c_0_611 767338 770451 - GH106
CAZyme Rep_184_c_0 Rep_184_c_0_612 770493 773306 - GH2
CAZyme Rep_184_c_0 Rep_184_c_0_613 773377 776478 - GH2
CAZyme Rep_184_c_0 Rep_184_c_0_614 776649 780758 - CBM57 | CBM97 | GH137 | GH2
CAZyme Rep_184_c_0 Rep_184_c_0_615 780768 783410 - GH138
pfam Rep_184_c_0 Rep_184_c_0_616 783407 783982 - Bac_rhamnosid_C
CAZyme Rep_184_c_0 Rep_184_c_0_617 783954 785495 - GH78
TC Rep_184_c_0 Rep_184_c_0_618 785479 786849 - 2.A.1.1.74
CAZyme Rep_184_c_0 Rep_184_c_0_619 787135 788901 - GH141
CAZyme Rep_184_c_0 Rep_184_c_0_620 788922 791033 - GH127
Gene ID: Rep_184_c_0_610
Type: CAZyme
Location: 765917 - 767326 (-)
Gene ID: Rep_184_c_0_611
Type: CAZyme
Location: 767338 - 770451 (-)
Gene ID: Rep_184_c_0_612
Type: CAZyme
Location: 770493 - 773306 (-)
Gene ID: Rep_184_c_0_613
Type: CAZyme
Location: 773377 - 776478 (-)
Gene ID: Rep_184_c_0_614
Type: CAZyme
Location: 776649 - 780758 (-)
Gene ID: Rep_184_c_0_615
Type: CAZyme
Location: 780768 - 783410 (-)
Gene ID: Rep_184_c_0_616
Type: pfam
Location: 783407 - 783982 (-)
Gene ID: Rep_184_c_0_617
Type: CAZyme
Location: 783954 - 785495 (-)
Gene ID: Rep_184_c_0_618
Type: TC
Location: 785479 - 786849 (-)
Gene ID: Rep_184_c_0_619
Type: CAZyme
Location: 787135 - 788901 (-)
Gene ID: Rep_184_c_0_620
Type: CAZyme
Location: 788922 - 791033 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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