Cluster: Rep_184_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: fructan
- Genome ID: Rep_184
- CGC Family ID: CGCFAM_00017
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_184_c_0 | Rep_184_c_0_403 | 514830 | 517934 | + | 1.B.14.6.1 |
| pfam | Rep_184_c_0 | Rep_184_c_0_404 | 517965 | 519698 | + | SusD_RagB | SusD-like_3 |
| pfam | Rep_184_c_0 | Rep_184_c_0_405 | 519726 | 521123 | + | DUF4960 |
| CAZyme | Rep_184_c_0 | Rep_184_c_0_406 | 521235 | 522815 | + | GH32 |
| CAZyme | Rep_184_c_0 | Rep_184_c_0_407 | 522982 | 524775 | + | GH32 |
| TC | Rep_184_c_0 | Rep_184_c_0_408 | 525201 | 528251 | + | 1.B.14.6.1 |
Gene ID: Rep_184_c_0_403
Type: TC
Location: 514830 - 517934 (+)
Type: TC
Location: 514830 - 517934 (+)
Gene ID: Rep_184_c_0_404
Type: pfam
Location: 517965 - 519698 (+)
Type: pfam
Location: 517965 - 519698 (+)
Gene ID: Rep_184_c_0_405
Type: pfam
Location: 519726 - 521123 (+)
Type: pfam
Location: 519726 - 521123 (+)
Gene ID: Rep_184_c_0_406
Type: CAZyme
Location: 521235 - 522815 (+)
Type: CAZyme
Location: 521235 - 522815 (+)
Gene ID: Rep_184_c_0_407
Type: CAZyme
Location: 522982 - 524775 (+)
Type: CAZyme
Location: 522982 - 524775 (+)
Gene ID: Rep_184_c_0_408
Type: TC
Location: 525201 - 528251 (+)
Type: TC
Location: 525201 - 528251 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000433175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.