Cluster: Rep_184_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_184
- CGC Family ID: CGCFAM_02868
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_184_c_2 | Rep_184_c_2_357 | 409940 | 410638 | + | 4.F.1.2.2 |
| pfam | Rep_184_c_2 | Rep_184_c_2_358 | 410851 | 411279 | + | GtrA_DPMS_TM |
| CAZyme | Rep_184_c_2 | Rep_184_c_2_359 | 411343 | 415173 | + | GT2 |
| pfam | Rep_184_c_2 | Rep_184_c_2_360 | 415356 | 416639 | + | BT1 |
| TC | Rep_184_c_2 | Rep_184_c_2_361 | 416737 | 417666 | + | 2.A.4.7.9 |
| TC | Rep_184_c_2 | Rep_184_c_2_362 | 417732 | 418136 | - | 2.A.5.5.2 |
Gene ID: Rep_184_c_2_357
Type: TC
Location: 409940 - 410638 (+)
Type: TC
Location: 409940 - 410638 (+)
Gene ID: Rep_184_c_2_358
Type: pfam
Location: 410851 - 411279 (+)
Type: pfam
Location: 410851 - 411279 (+)
Gene ID: Rep_184_c_2_359
Type: CAZyme
Location: 411343 - 415173 (+)
Type: CAZyme
Location: 411343 - 415173 (+)
Gene ID: Rep_184_c_2_360
Type: pfam
Location: 415356 - 416639 (+)
Type: pfam
Location: 415356 - 416639 (+)
Gene ID: Rep_184_c_2_361
Type: TC
Location: 416737 - 417666 (+)
Type: TC
Location: 416737 - 417666 (+)
Gene ID: Rep_184_c_2_362
Type: TC
Location: 417732 - 418136 (-)
Type: TC
Location: 417732 - 418136 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000433175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_184_c_2_360 | vegetarian > vegan | 2.97403 | 0.02650 |