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Cluster: Rep_184_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_184_c_2 Rep_184_c_2_316 363210 365546 + 1.B.14.15.2
pfam Rep_184_c_2 Rep_184_c_2_317 365705 367057 + NQRA_N | NQRA_SLBB | NQRA_2nd
TC Rep_184_c_2 Rep_184_c_2_318 367082 368236 + 3.D.5.1.1
pfam Rep_184_c_2 Rep_184_c_2_319 368256 368972 + FMN_bind
TC Rep_184_c_2 Rep_184_c_2_320 368988 369605 + 3.D.5.1.1
TC Rep_184_c_2 Rep_184_c_2_321 369630 370256 + 3.D.5.1.1
TC Rep_184_c_2 Rep_184_c_2_322 370317 371585 + 3.D.5.1.1
pfam Rep_184_c_2 Rep_184_c_2_323 371632 372864 + HI0933_like | NAD_binding_9 | HI0933_like_1st
pfam Rep_184_c_2 Rep_184_c_2_324 372951 374105 - Fe-ADH | Fe-ADH_2 | ADH_Fe_C
CAZyme Rep_184_c_2 Rep_184_c_2_325 374348 376312 - GH97
Gene ID: Rep_184_c_2_316
Type: TC
Location: 363210 - 365546 (+)
Gene ID: Rep_184_c_2_317
Type: pfam
Location: 365705 - 367057 (+)
Gene ID: Rep_184_c_2_318
Type: TC
Location: 367082 - 368236 (+)
Gene ID: Rep_184_c_2_319
Type: pfam
Location: 368256 - 368972 (+)
Gene ID: Rep_184_c_2_320
Type: TC
Location: 368988 - 369605 (+)
Gene ID: Rep_184_c_2_321
Type: TC
Location: 369630 - 370256 (+)
Gene ID: Rep_184_c_2_322
Type: TC
Location: 370317 - 371585 (+)
Gene ID: Rep_184_c_2_323
Type: pfam
Location: 371632 - 372864 (+)
Gene ID: Rep_184_c_2_324
Type: pfam
Location: 372951 - 374105 (-)
Gene ID: Rep_184_c_2_325
Type: CAZyme
Location: 374348 - 376312 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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