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Cluster: Rep_184_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_184_c_1 Rep_184_c_1_114 112234 114696 + 1.B.14.8.7
peptidase Rep_184_c_1 Rep_184_c_1_115 114848 116887 - M13.UPW
TC Rep_184_c_1 Rep_184_c_1_116 117006 118973 - 3.A.1.120.6
NULL(UNKNOWN) Rep_184_c_1 Rep_184_c_1_117 120081 120341 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_184_c_1 Rep_184_c_1_118 120373 121503 - GT4
CAZyme Rep_184_c_1 Rep_184_c_1_119 121519 122451 - GT2
pfam Rep_184_c_1 Rep_184_c_1_120 122454 123140 - Hexapep | Hexapep_2
CAZyme Rep_184_c_1 Rep_184_c_1_121 123141 123884 - GT2
CAZyme Rep_184_c_1 Rep_184_c_1_122 123900 124928 - GT92
Gene ID: Rep_184_c_1_114
Type: TC
Location: 112234 - 114696 (+)
Gene ID: Rep_184_c_1_115
Type: peptidase
Location: 114848 - 116887 (-)
Gene ID: Rep_184_c_1_116
Type: TC
Location: 117006 - 118973 (-)
Gene ID: Rep_184_c_1_117
Type:
Location: 120081 - 120341 (-)
Gene ID: Rep_184_c_1_118
Type: CAZyme
Location: 120373 - 121503 (-)
Gene ID: Rep_184_c_1_119
Type: CAZyme
Location: 121519 - 122451 (-)
Gene ID: Rep_184_c_1_120
Type: pfam
Location: 122454 - 123140 (-)
Gene ID: Rep_184_c_1_121
Type: CAZyme
Location: 123141 - 123884 (-)
Gene ID: Rep_184_c_1_122
Type: CAZyme
Location: 123900 - 124928 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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