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Cluster: Rep_184_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_184_c_0 Rep_184_c_0_901 1158957 1160630 + 2.A.17.4.5
NULL(UNKNOWN) Rep_184_c_0 Rep_184_c_0_902 1160972 1161088 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_184_c_0 Rep_184_c_0_903 1161127 1162419 + GH28
TF Rep_184_c_0 Rep_184_c_0_904 1162641 1163234 - GerE
TC Rep_184_c_0 Rep_184_c_0_905 1163351 1164508 - 3.B.1.1.2
pfam Rep_184_c_0 Rep_184_c_0_906 1164619 1165071 - Biotin_lipoyl | Biotin_lipoyl_2
pfam Rep_184_c_0 Rep_184_c_0_907 1165157 1166122 - OAD_gamma
TC Rep_184_c_0 Rep_184_c_0_908 1166219 1167907 - 2.A.81.1.2
Gene ID: Rep_184_c_0_901
Type: TC
Location: 1158957 - 1160630 (+)
Gene ID: Rep_184_c_0_902
Type:
Location: 1160972 - 1161088 (-)
Gene ID: Rep_184_c_0_903
Type: CAZyme
Location: 1161127 - 1162419 (+)
Gene ID: Rep_184_c_0_904
Type: TF
Location: 1162641 - 1163234 (-)
Gene ID: Rep_184_c_0_905
Type: TC
Location: 1163351 - 1164508 (-)
Gene ID: Rep_184_c_0_906
Type: pfam
Location: 1164619 - 1165071 (-)
Gene ID: Rep_184_c_0_907
Type: pfam
Location: 1165157 - 1166122 (-)
Gene ID: Rep_184_c_0_908
Type: TC
Location: 1166219 - 1167907 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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