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Cluster: Rep_184_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_184_c_0 Rep_184_c_0_80 99011 100468 + 2.A.66.1.2
pfam Rep_184_c_0 Rep_184_c_0_81 100501 102189 + DUF6377
CAZyme Rep_184_c_0 Rep_184_c_0_82 102396 104054 - GH78
peptidase Rep_184_c_0 Rep_184_c_0_83 104140 105747 - S09.UPW
CAZyme Rep_184_c_0 Rep_184_c_0_84 106073 108373 - GH3
pfam Rep_184_c_0 Rep_184_c_0_85 108579 109823 - Thump_like | PG_1098_Fer
peptidase Rep_184_c_0 Rep_184_c_0_86 110137 110808 - M15.UPD
CAZyme Rep_184_c_0 Rep_184_c_0_87 111286 113889 - GH3
Gene ID: Rep_184_c_0_80
Type: TC
Location: 99011 - 100468 (+)
Gene ID: Rep_184_c_0_81
Type: pfam
Location: 100501 - 102189 (+)
Gene ID: Rep_184_c_0_82
Type: CAZyme
Location: 102396 - 104054 (-)
Gene ID: Rep_184_c_0_83
Type: peptidase
Location: 104140 - 105747 (-)
Gene ID: Rep_184_c_0_84
Type: CAZyme
Location: 106073 - 108373 (-)
Gene ID: Rep_184_c_0_85
Type: pfam
Location: 108579 - 109823 (-)
Gene ID: Rep_184_c_0_86
Type: peptidase
Location: 110137 - 110808 (-)
Gene ID: Rep_184_c_0_87
Type: CAZyme
Location: 111286 - 113889 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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