Cluster: Rep_1846_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1846
- CGC Family ID: CGCFAM_11241
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1846_c_21 | Rep_1846_c_21_2 | 1131 | 2768 | - | GT83 |
| TC | Rep_1846_c_21 | Rep_1846_c_21_3 | 2903 | 4210 | - | 2.A.24.1.1 |
| NULL(UNKNOWN) | Rep_1846_c_21 | Rep_1846_c_21_4 | 4502 | 4819 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1846_c_21 | Rep_1846_c_21_5 | 4673 | 5014 | - | PqqD |
| TC | Rep_1846_c_21 | Rep_1846_c_21_6 | 5079 | 6971 | - | 2.A.67.4.2 |
Gene ID: Rep_1846_c_21_2
Type: CAZyme
Location: 1131 - 2768 (-)
Type: CAZyme
Location: 1131 - 2768 (-)
Gene ID: Rep_1846_c_21_3
Type: TC
Location: 2903 - 4210 (-)
Type: TC
Location: 2903 - 4210 (-)
Gene ID: Rep_1846_c_21_4
Type:
Location: 4502 - 4819 (+)
Type:
Location: 4502 - 4819 (+)
Gene ID: Rep_1846_c_21_5
Type: pfam
Location: 4673 - 5014 (-)
Type: pfam
Location: 4673 - 5014 (-)
Gene ID: Rep_1846_c_21_6
Type: TC
Location: 5079 - 6971 (-)
Type: TC
Location: 5079 - 6971 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus sp900538365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.