Cluster: Rep_1845_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1845
- CGC Family ID: CGCFAM_01667
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1845_c_0 | Rep_1845_c_0_1303 | 1352958 | 1354301 | - | 2.A.25.1.4 |
| TC | Rep_1845_c_0 | Rep_1845_c_0_1304 | 1354350 | 1356080 | - | 3.A.1.203.11 |
| TC | Rep_1845_c_0 | Rep_1845_c_0_1305 | 1356240 | 1359377 | - | 2.A.6.2.22 |
| TC | Rep_1845_c_0 | Rep_1845_c_0_1306 | 1359394 | 1360554 | - | 2.A.6.2.19 |
| NULL(UNKNOWN) | Rep_1845_c_0 | Rep_1845_c_0_1307 | 1360678 | 1362300 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1845_c_0 | Rep_1845_c_0_1308 | 1362562 | 1363983 | + | AA4 |
Gene ID: Rep_1845_c_0_1303
Type: TC
Location: 1352958 - 1354301 (-)
Type: TC
Location: 1352958 - 1354301 (-)
Gene ID: Rep_1845_c_0_1304
Type: TC
Location: 1354350 - 1356080 (-)
Type: TC
Location: 1354350 - 1356080 (-)
Gene ID: Rep_1845_c_0_1305
Type: TC
Location: 1356240 - 1359377 (-)
Type: TC
Location: 1356240 - 1359377 (-)
Gene ID: Rep_1845_c_0_1306
Type: TC
Location: 1359394 - 1360554 (-)
Type: TC
Location: 1359394 - 1360554 (-)
Gene ID: Rep_1845_c_0_1307
Type:
Location: 1360678 - 1362300 (-)
Type:
Location: 1360678 - 1362300 (-)
Gene ID: Rep_1845_c_0_1308
Type: CAZyme
Location: 1362562 - 1363983 (+)
Type: CAZyme
Location: 1362562 - 1363983 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus intestini
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_1845_c_0_1303 | vegetarian > omnivore | 1.15464 | 0.04753 |