Cluster: Rep_1845_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1845
- CGC Family ID: CGCFAM_11241
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1845_c_0 | Rep_1845_c_0_1265 | 1312912 | 1314549 | - | GT83 |
| TC | Rep_1845_c_0 | Rep_1845_c_0_1266 | 1314686 | 1315993 | - | 2.A.24.1.1 |
| pfam | Rep_1845_c_0 | Rep_1845_c_0_1267 | 1316457 | 1316801 | - | PqqD |
| TC | Rep_1845_c_0 | Rep_1845_c_0_1268 | 1316866 | 1318758 | - | 2.A.67.4.2 |
Gene ID: Rep_1845_c_0_1265
Type: CAZyme
Location: 1312912 - 1314549 (-)
Type: CAZyme
Location: 1312912 - 1314549 (-)
Gene ID: Rep_1845_c_0_1266
Type: TC
Location: 1314686 - 1315993 (-)
Type: TC
Location: 1314686 - 1315993 (-)
Gene ID: Rep_1845_c_0_1267
Type: pfam
Location: 1316457 - 1316801 (-)
Type: pfam
Location: 1316457 - 1316801 (-)
Gene ID: Rep_1845_c_0_1268
Type: TC
Location: 1316866 - 1318758 (-)
Type: TC
Location: 1316866 - 1318758 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus intestini
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.