Cluster: Rep_1845_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1845
- CGC Family ID: CGCFAM_11240
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1845_c_0 | Rep_1845_c_0_1244 | 1284704 | 1286158 | - | 2.A.3.7.2 |
| NULL(UNKNOWN) | Rep_1845_c_0 | Rep_1845_c_0_1245 | 1287163 | 1287564 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1845_c_0 | Rep_1845_c_0_1246 | 1287641 | 1287865 | - | Zn_ribbon_ISL3 |
| CAZyme | Rep_1845_c_0 | Rep_1845_c_0_1247 | 1288044 | 1288787 | - | GT2 |
| pfam | Rep_1845_c_0 | Rep_1845_c_0_1248 | 1288790 | 1290823 | - | Sulfatase |
| TC | Rep_1845_c_0 | Rep_1845_c_0_1249 | 1290968 | 1292407 | - | 2.A.118.1.4 |
Gene ID: Rep_1845_c_0_1244
Type: TC
Location: 1284704 - 1286158 (-)
Type: TC
Location: 1284704 - 1286158 (-)
Gene ID: Rep_1845_c_0_1245
Type:
Location: 1287163 - 1287564 (+)
Type:
Location: 1287163 - 1287564 (+)
Gene ID: Rep_1845_c_0_1246
Type: pfam
Location: 1287641 - 1287865 (-)
Type: pfam
Location: 1287641 - 1287865 (-)
Gene ID: Rep_1845_c_0_1247
Type: CAZyme
Location: 1288044 - 1288787 (-)
Type: CAZyme
Location: 1288044 - 1288787 (-)
Gene ID: Rep_1845_c_0_1248
Type: pfam
Location: 1288790 - 1290823 (-)
Type: pfam
Location: 1288790 - 1290823 (-)
Gene ID: Rep_1845_c_0_1249
Type: TC
Location: 1290968 - 1292407 (-)
Type: TC
Location: 1290968 - 1292407 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus intestini
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.