Cluster: Rep_1845_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1845
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1845_c_0 | Rep_1845_c_0_180 | 185790 | 186755 | + | 9.B.146.1.6 |
| pfam | Rep_1845_c_0 | Rep_1845_c_0_181 | 186772 | 188151 | + | Mur_ligase_C | Mur_ligase_M |
| CAZyme | Rep_1845_c_0 | Rep_1845_c_0_182 | 188151 | 189266 | + | GT28 |
Gene ID: Rep_1845_c_0_180
Type: TC
Location: 185790 - 186755 (+)
Type: TC
Location: 185790 - 186755 (+)
Gene ID: Rep_1845_c_0_181
Type: pfam
Location: 186772 - 188151 (+)
Type: pfam
Location: 186772 - 188151 (+)
Gene ID: Rep_1845_c_0_182
Type: CAZyme
Location: 188151 - 189266 (+)
Type: CAZyme
Location: 188151 - 189266 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus intestini
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.