dbCAN Logo

Cluster: Rep_1830_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1830_c_1 Rep_1830_c_1_271 330406 331161 - 3.A.1.25.4
TC Rep_1830_c_1 Rep_1830_c_1_272 331161 332000 - 3.A.1.33.1
TC Rep_1830_c_1 Rep_1830_c_1_273 331997 332848 - 3.A.1.32.3
pfam Rep_1830_c_1 Rep_1830_c_1_274 332874 333464 - TrpP
pfam Rep_1830_c_1 Rep_1830_c_1_275 334022 334375 - Hpt
TC Rep_1830_c_1 Rep_1830_c_1_276 334388 336325 - 8.A.59.4.2
TC Rep_1830_c_1 Rep_1830_c_1_277 336653 338005 - 9.B.34.1.2
NULL(UNKNOWN) Rep_1830_c_1 Rep_1830_c_1_278 338486 338608 - NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_1830_c_1 Rep_1830_c_1_279 338676 339356 - Pribosyltran
CAZyme Rep_1830_c_1 Rep_1830_c_1_280 339382 340671 - GT28
Gene ID: Rep_1830_c_1_271
Type: TC
Location: 330406 - 331161 (-)
Gene ID: Rep_1830_c_1_272
Type: TC
Location: 331161 - 332000 (-)
Gene ID: Rep_1830_c_1_273
Type: TC
Location: 331997 - 332848 (-)
Gene ID: Rep_1830_c_1_274
Type: pfam
Location: 332874 - 333464 (-)
Gene ID: Rep_1830_c_1_275
Type: pfam
Location: 334022 - 334375 (-)
Gene ID: Rep_1830_c_1_276
Type: TC
Location: 334388 - 336325 (-)
Gene ID: Rep_1830_c_1_277
Type: TC
Location: 336653 - 338005 (-)
Gene ID: Rep_1830_c_1_278
Type:
Location: 338486 - 338608 (-)
Gene ID: Rep_1830_c_1_279
Type: STP
Location: 338676 - 339356 (-)
Gene ID: Rep_1830_c_1_280
Type: CAZyme
Location: 339382 - 340671 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List