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Cluster: Rep_1813_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1813_c_36 Rep_1813_c_36_2 1341 2372 + 9.B.146.1.6
pfam Rep_1813_c_36 Rep_1813_c_36_3 2449 3870 + Mur_ligase_C | Mur_ligase_M
TC Rep_1813_c_36 Rep_1813_c_36_4 3863 5422 + 2.A.103.1.3
CAZyme Rep_1813_c_36 Rep_1813_c_36_5 5412 6536 + GT28
TC Rep_1813_c_36 Rep_1813_c_36_6 6622 8109 - 3.A.1.31.2
TC Rep_1813_c_36 Rep_1813_c_36_7 8111 8833 - 3.A.1.31.2
TC Rep_1813_c_36 Rep_1813_c_36_8 8833 9423 - 3.A.1.31.2
TC Rep_1813_c_36 Rep_1813_c_36_9 9434 10561 - 3.A.1.21.1
Gene ID: Rep_1813_c_36_2
Type: TC
Location: 1341 - 2372 (+)
Gene ID: Rep_1813_c_36_3
Type: pfam
Location: 2449 - 3870 (+)
Gene ID: Rep_1813_c_36_4
Type: TC
Location: 3863 - 5422 (+)
Gene ID: Rep_1813_c_36_5
Type: CAZyme
Location: 5412 - 6536 (+)
Gene ID: Rep_1813_c_36_6
Type: TC
Location: 6622 - 8109 (-)
Gene ID: Rep_1813_c_36_7
Type: TC
Location: 8111 - 8833 (-)
Gene ID: Rep_1813_c_36_8
Type: TC
Location: 8833 - 9423 (-)
Gene ID: Rep_1813_c_36_9
Type: TC
Location: 9434 - 10561 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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