Cluster: Rep_1813_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1813
- CGC Family ID: CGCFAM_03828
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1813_c_26 | Rep_1813_c_26_4 | 3288 | 4103 | - | 3.A.1.17.13 |
| TC | Rep_1813_c_26 | Rep_1813_c_26_5 | 4106 | 5155 | - | 3.A.1.17.8 |
| TC | Rep_1813_c_26 | Rep_1813_c_26_6 | 5155 | 5937 | - | 3.A.1.17.13 |
| pfam | Rep_1813_c_26 | Rep_1813_c_26_7 | 5948 | 6286 | - | Thiamine_BP |
| NULL(UNKNOWN) | Rep_1813_c_26 | Rep_1813_c_26_8 | 6807 | 7415 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1813_c_26 | Rep_1813_c_26_9 | 7573 | 9756 | - | GH78 |
Gene ID: Rep_1813_c_26_4
Type: TC
Location: 3288 - 4103 (-)
Type: TC
Location: 3288 - 4103 (-)
Gene ID: Rep_1813_c_26_5
Type: TC
Location: 4106 - 5155 (-)
Type: TC
Location: 4106 - 5155 (-)
Gene ID: Rep_1813_c_26_6
Type: TC
Location: 5155 - 5937 (-)
Type: TC
Location: 5155 - 5937 (-)
Gene ID: Rep_1813_c_26_7
Type: pfam
Location: 5948 - 6286 (-)
Type: pfam
Location: 5948 - 6286 (-)
Gene ID: Rep_1813_c_26_8
Type:
Location: 6807 - 7415 (+)
Type:
Location: 6807 - 7415 (+)
Gene ID: Rep_1813_c_26_9
Type: CAZyme
Location: 7573 - 9756 (-)
Type: CAZyme
Location: 7573 - 9756 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Olegusella
Species
Olegusella massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.