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Cluster: Rep_1813_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1813_c_11 Rep_1813_c_11_5 4427 6391 + 4.A.1.2.12
STP Rep_1813_c_11 Rep_1813_c_11_6 6483 7433 + PfkB
CAZyme Rep_1813_c_11 Rep_1813_c_11_7 7491 9014 + GH32
pfam Rep_1813_c_11 Rep_1813_c_11_8 9055 9861 + S6PP | Hydrolase_3
pfam Rep_1813_c_11 Rep_1813_c_11_9 9937 10836 - S6PP | Hydrolase_3
CAZyme Rep_1813_c_11 Rep_1813_c_11_10 10851 12266 - GH13_18
CAZyme Rep_1813_c_11 Rep_1813_c_11_11 12331 13629 - GH32
CAZyme Rep_1813_c_11 Rep_1813_c_11_12 13653 15137 - GH32
pfam Rep_1813_c_11 Rep_1813_c_11_13 16187 16744 - Metallophos | Metallophos_2
TC Rep_1813_c_11 Rep_1813_c_11_14 17204 18373 + 3.A.9.1.1
Gene ID: Rep_1813_c_11_5
Type: TC
Location: 4427 - 6391 (+)
Gene ID: Rep_1813_c_11_6
Type: STP
Location: 6483 - 7433 (+)
Gene ID: Rep_1813_c_11_7
Type: CAZyme
Location: 7491 - 9014 (+)
Gene ID: Rep_1813_c_11_8
Type: pfam
Location: 9055 - 9861 (+)
Gene ID: Rep_1813_c_11_9
Type: pfam
Location: 9937 - 10836 (-)
Gene ID: Rep_1813_c_11_10
Type: CAZyme
Location: 10851 - 12266 (-)
Gene ID: Rep_1813_c_11_11
Type: CAZyme
Location: 12331 - 13629 (-)
Gene ID: Rep_1813_c_11_12
Type: CAZyme
Location: 13653 - 15137 (-)
Gene ID: Rep_1813_c_11_13
Type: pfam
Location: 16187 - 16744 (-)
Gene ID: Rep_1813_c_11_14
Type: TC
Location: 17204 - 18373 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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