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Cluster: Rep_1813_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1813_c_7 Rep_1813_c_7_3 2385 3860 - GT5
TC Rep_1813_c_7 Rep_1813_c_7_4 4142 5347 - 3.A.1.1.26
CAZyme Rep_1813_c_7 Rep_1813_c_7_5 5335 6843 - GH77
TC Rep_1813_c_7 Rep_1813_c_7_6 6846 7712 - 3.A.1.1.45
TC Rep_1813_c_7 Rep_1813_c_7_7 7712 8614 - 3.A.1.1.45
TC Rep_1813_c_7 Rep_1813_c_7_8 8739 10067 - 3.A.1.1.45
TF Rep_1813_c_7 Rep_1813_c_7_9 10154 11173 - LacI
TC Rep_1813_c_7 Rep_1813_c_7_10 11339 13903 - 3.A.3.5.15
Gene ID: Rep_1813_c_7_3
Type: CAZyme
Location: 2385 - 3860 (-)
Gene ID: Rep_1813_c_7_4
Type: TC
Location: 4142 - 5347 (-)
Gene ID: Rep_1813_c_7_5
Type: CAZyme
Location: 5335 - 6843 (-)
Gene ID: Rep_1813_c_7_6
Type: TC
Location: 6846 - 7712 (-)
Gene ID: Rep_1813_c_7_7
Type: TC
Location: 7712 - 8614 (-)
Gene ID: Rep_1813_c_7_8
Type: TC
Location: 8739 - 10067 (-)
Gene ID: Rep_1813_c_7_9
Type: TF
Location: 10154 - 11173 (-)
Gene ID: Rep_1813_c_7_10
Type: TC
Location: 11339 - 13903 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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