Cluster: Rep_1812_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1812
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1812_c_10 | Rep_1812_c_10_4 | 3454 | 4773 | + | 3.A.1.1.45 |
| TC | Rep_1812_c_10 | Rep_1812_c_10_5 | 4863 | 5717 | + | 3.A.1.1.45 |
| TC | Rep_1812_c_10 | Rep_1812_c_10_6 | 5717 | 6556 | + | 3.A.1.1.45 |
| TC | Rep_1812_c_10 | Rep_1812_c_10_7 | 6661 | 7857 | + | 3.A.1.1.22 |
| CAZyme | Rep_1812_c_10 | Rep_1812_c_10_8 | 7942 | 9435 | + | GH77 |
| CAZyme | Rep_1812_c_10 | Rep_1812_c_10_9 | 9435 | 11699 | + | GT35 |
Gene ID: Rep_1812_c_10_4
Type: TC
Location: 3454 - 4773 (+)
Type: TC
Location: 3454 - 4773 (+)
Gene ID: Rep_1812_c_10_5
Type: TC
Location: 4863 - 5717 (+)
Type: TC
Location: 4863 - 5717 (+)
Gene ID: Rep_1812_c_10_6
Type: TC
Location: 5717 - 6556 (+)
Type: TC
Location: 5717 - 6556 (+)
Gene ID: Rep_1812_c_10_7
Type: TC
Location: 6661 - 7857 (+)
Type: TC
Location: 6661 - 7857 (+)
Gene ID: Rep_1812_c_10_8
Type: CAZyme
Location: 7942 - 9435 (+)
Type: CAZyme
Location: 7942 - 9435 (+)
Gene ID: Rep_1812_c_10_9
Type: CAZyme
Location: 9435 - 11699 (+)
Type: CAZyme
Location: 9435 - 11699 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Lancefieldella
Species
Lancefieldella sp024691995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.