Cluster: Rep_180_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_180
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_180_c_118 | Rep_180_c_118_8 | 5057 | 5869 | + | GT5 |
| pfam | Rep_180_c_118 | Rep_180_c_118_9 | 5916 | 7418 | + | DUF4270 |
| TC | Rep_180_c_118 | Rep_180_c_118_10 | 7477 | 8298 | + | 3.A.1.147.2 |
| pfam | Rep_180_c_118 | Rep_180_c_118_11 | 8666 | 9775 | + | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN |
| pfam | Rep_180_c_118 | Rep_180_c_118_12 | 9795 | 10238 | + | DUF386 |
| CAZyme | Rep_180_c_118 | Rep_180_c_118_13 | 10280 | 12352 | + | GH13_8 |
Gene ID: Rep_180_c_118_8
Type: CAZyme
Location: 5057 - 5869 (+)
Type: CAZyme
Location: 5057 - 5869 (+)
Gene ID: Rep_180_c_118_9
Type: pfam
Location: 5916 - 7418 (+)
Type: pfam
Location: 5916 - 7418 (+)
Gene ID: Rep_180_c_118_10
Type: TC
Location: 7477 - 8298 (+)
Type: TC
Location: 7477 - 8298 (+)
Gene ID: Rep_180_c_118_11
Type: pfam
Location: 8666 - 9775 (+)
Type: pfam
Location: 8666 - 9775 (+)
Gene ID: Rep_180_c_118_12
Type: pfam
Location: 9795 - 10238 (+)
Type: pfam
Location: 9795 - 10238 (+)
Gene ID: Rep_180_c_118_13
Type: CAZyme
Location: 10280 - 12352 (+)
Type: CAZyme
Location: 10280 - 12352 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp905215655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.