Cluster: Rep_180_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_180
- CGC Family ID: CGCFAM_03910
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_180_c_30 | Rep_180_c_30_9 | 6291 | 7217 | - | 1.A.30.2.9 |
| NULL(UNKNOWN) | Rep_180_c_30 | Rep_180_c_30_10 | 7341 | 7505 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_180_c_30 | Rep_180_c_30_11 | 8120 | 9064 | + | CBM50 |
| NULL(UNKNOWN) | Rep_180_c_30 | Rep_180_c_30_12 | 9152 | 9610 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_180_c_30 | Rep_180_c_30_13 | 9798 | 10616 | - | GT2 |
| CAZyme | Rep_180_c_30 | Rep_180_c_30_14 | 10613 | 11890 | - | GT4 |
Gene ID: Rep_180_c_30_9
Type: TC
Location: 6291 - 7217 (-)
Type: TC
Location: 6291 - 7217 (-)
Gene ID: Rep_180_c_30_10
Type:
Location: 7341 - 7505 (-)
Type:
Location: 7341 - 7505 (-)
Gene ID: Rep_180_c_30_11
Type: CAZyme
Location: 8120 - 9064 (+)
Type: CAZyme
Location: 8120 - 9064 (+)
Gene ID: Rep_180_c_30_12
Type:
Location: 9152 - 9610 (-)
Type:
Location: 9152 - 9610 (-)
Gene ID: Rep_180_c_30_13
Type: CAZyme
Location: 9798 - 10616 (-)
Type: CAZyme
Location: 9798 - 10616 (-)
Gene ID: Rep_180_c_30_14
Type: CAZyme
Location: 10613 - 11890 (-)
Type: CAZyme
Location: 10613 - 11890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp905215655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_180_c_30_11 | vegetarian > vegan | 1.14063 | 0.04656 |