Cluster: Rep_180_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_180
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_180_c_220 | Rep_180_c_220_1 | 178 | 1998 | - | 2.A.49.6.1 |
| pfam | Rep_180_c_220 | Rep_180_c_220_2 | 2098 | 2667 | - | Sua5_yciO_yrdC |
| TC | Rep_180_c_220 | Rep_180_c_220_3 | 3189 | 3473 | - | 1.A.8.13.3 |
| TC | Rep_180_c_220 | Rep_180_c_220_4 | 4043 | 7414 | + | 1.B.14.6.1 |
| TC | Rep_180_c_220 | Rep_180_c_220_5 | 7441 | 9423 | + | 8.A.46.1.2 |
| pfam | Rep_180_c_220 | Rep_180_c_220_6 | 9446 | 11128 | + | DUF5123 |
| CAZyme | Rep_180_c_220 | Rep_180_c_220_7 | 11774 | 13780 | + | GH28 |
Gene ID: Rep_180_c_220_1
Type: TC
Location: 178 - 1998 (-)
Type: TC
Location: 178 - 1998 (-)
Gene ID: Rep_180_c_220_2
Type: pfam
Location: 2098 - 2667 (-)
Type: pfam
Location: 2098 - 2667 (-)
Gene ID: Rep_180_c_220_3
Type: TC
Location: 3189 - 3473 (-)
Type: TC
Location: 3189 - 3473 (-)
Gene ID: Rep_180_c_220_4
Type: TC
Location: 4043 - 7414 (+)
Type: TC
Location: 4043 - 7414 (+)
Gene ID: Rep_180_c_220_5
Type: TC
Location: 7441 - 9423 (+)
Type: TC
Location: 7441 - 9423 (+)
Gene ID: Rep_180_c_220_6
Type: pfam
Location: 9446 - 11128 (+)
Type: pfam
Location: 9446 - 11128 (+)
Gene ID: Rep_180_c_220_7
Type: CAZyme
Location: 11774 - 13780 (+)
Type: CAZyme
Location: 11774 - 13780 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp905215655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.