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Cluster: Rep_1809_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1809_c_76 Rep_1809_c_76_20 24286 25185 - GT2
CAZyme Rep_1809_c_76 Rep_1809_c_76_21 25185 26858 - GT4
NULL(UNKNOWN) Rep_1809_c_76 Rep_1809_c_76_22 27469 28656 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_1809_c_76 Rep_1809_c_76_23 29324 29920 + Glycos_transf_1 | Glyco_trans_1_2 | Glyco_trans_1_4
CAZyme Rep_1809_c_76 Rep_1809_c_76_24 30046 31188 + GT4
pfam Rep_1809_c_76 Rep_1809_c_76_25 31288 33762 - YfhO
CAZyme Rep_1809_c_76 Rep_1809_c_76_26 33836 34780 - GT2
TC Rep_1809_c_76 Rep_1809_c_76_27 34891 35745 + 8.A.5.1.5
Gene ID: Rep_1809_c_76_20
Type: CAZyme
Location: 24286 - 25185 (-)
Gene ID: Rep_1809_c_76_21
Type: CAZyme
Location: 25185 - 26858 (-)
Gene ID: Rep_1809_c_76_22
Type:
Location: 27469 - 28656 (+)
Gene ID: Rep_1809_c_76_23
Type: pfam
Location: 29324 - 29920 (+)
Gene ID: Rep_1809_c_76_24
Type: CAZyme
Location: 30046 - 31188 (+)
Gene ID: Rep_1809_c_76_25
Type: pfam
Location: 31288 - 33762 (-)
Gene ID: Rep_1809_c_76_26
Type: CAZyme
Location: 33836 - 34780 (-)
Gene ID: Rep_1809_c_76_27
Type: TC
Location: 34891 - 35745 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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