Cluster: Rep_1808_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1808
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1808_c_213 | Rep_1808_c_213_11 | 16135 | 17319 | - | GH179 |
| TF | Rep_1808_c_213 | Rep_1808_c_213_12 | 17561 | 18577 | + | LacI |
| TC | Rep_1808_c_213 | Rep_1808_c_213_13 | 18848 | 20509 | - | 2.A.1.1.26 |
Gene ID: Rep_1808_c_213_11
Type: CAZyme
Location: 16135 - 17319 (-)
Type: CAZyme
Location: 16135 - 17319 (-)
Gene ID: Rep_1808_c_213_12
Type: TF
Location: 17561 - 18577 (+)
Type: TF
Location: 17561 - 18577 (+)
Gene ID: Rep_1808_c_213_13
Type: TC
Location: 18848 - 20509 (-)
Type: TC
Location: 18848 - 20509 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.