Cluster: Rep_1808_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1808
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1808_c_96 | Rep_1808_c_96_17 | 16422 | 18869 | + | GT51 |
| pfam | Rep_1808_c_96 | Rep_1808_c_96_18 | 19095 | 19379 | + | Ribosomal_S6 |
| TC | Rep_1808_c_96 | Rep_1808_c_96_19 | 19400 | 19975 | + | 3.A.7.19.1 |
Gene ID: Rep_1808_c_96_17
Type: CAZyme
Location: 16422 - 18869 (+)
Type: CAZyme
Location: 16422 - 18869 (+)
Gene ID: Rep_1808_c_96_18
Type: pfam
Location: 19095 - 19379 (+)
Type: pfam
Location: 19095 - 19379 (+)
Gene ID: Rep_1808_c_96_19
Type: TC
Location: 19400 - 19975 (+)
Type: TC
Location: 19400 - 19975 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.