Cluster: Rep_1808_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1808
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1808_c_75 | Rep_1808_c_75_14 | 12976 | 14106 | - | GT4 |
| pfam | Rep_1808_c_75 | Rep_1808_c_75_15 | 14103 | 15053 | - | Lip_A_acyltrans |
| TC | Rep_1808_c_75 | Rep_1808_c_75_16 | 15054 | 15668 | - | 4.F.1.3.1 |
Gene ID: Rep_1808_c_75_14
Type: CAZyme
Location: 12976 - 14106 (-)
Type: CAZyme
Location: 12976 - 14106 (-)
Gene ID: Rep_1808_c_75_15
Type: pfam
Location: 14103 - 15053 (-)
Type: pfam
Location: 14103 - 15053 (-)
Gene ID: Rep_1808_c_75_16
Type: TC
Location: 15054 - 15668 (-)
Type: TC
Location: 15054 - 15668 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.