dbCAN Logo

Cluster: Rep_1806_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1806_c_30 Rep_1806_c_30_5 3802 6366 + 2.A.6.5.5
pfam Rep_1806_c_30 Rep_1806_c_30_6 6403 7728 - DnaB | DnaB_C | AAA_25
TC Rep_1806_c_30 Rep_1806_c_30_7 7963 9276 + 2.A.66.1.28
pfam Rep_1806_c_30 Rep_1806_c_30_8 9408 9869 - Ribosomal_L9_N | Ribosomal_L9_C
pfam Rep_1806_c_30 Rep_1806_c_30_9 9885 10127 - Ribosomal_S18
TC Rep_1806_c_30 Rep_1806_c_30_10 10172 10747 - 3.A.7.19.1
pfam Rep_1806_c_30 Rep_1806_c_30_11 10768 11052 - Ribosomal_S6
CAZyme Rep_1806_c_30 Rep_1806_c_30_12 11277 13718 - GT51
STP Rep_1806_c_30 Rep_1806_c_30_13 14173 15585 - AAA
pfam Rep_1806_c_30 Rep_1806_c_30_14 16210 16479 + Ribonuclease_P
TC Rep_1806_c_30 Rep_1806_c_30_15 16822 18195 + 2.A.9.3.5
Gene ID: Rep_1806_c_30_5
Type: TC
Location: 3802 - 6366 (+)
Gene ID: Rep_1806_c_30_6
Type: pfam
Location: 6403 - 7728 (-)
Gene ID: Rep_1806_c_30_7
Type: TC
Location: 7963 - 9276 (+)
Gene ID: Rep_1806_c_30_8
Type: pfam
Location: 9408 - 9869 (-)
Gene ID: Rep_1806_c_30_9
Type: pfam
Location: 9885 - 10127 (-)
Gene ID: Rep_1806_c_30_10
Type: TC
Location: 10172 - 10747 (-)
Gene ID: Rep_1806_c_30_11
Type: pfam
Location: 10768 - 11052 (-)
Gene ID: Rep_1806_c_30_12
Type: CAZyme
Location: 11277 - 13718 (-)
Gene ID: Rep_1806_c_30_13
Type: STP
Location: 14173 - 15585 (-)
Gene ID: Rep_1806_c_30_14
Type: pfam
Location: 16210 - 16479 (+)
Gene ID: Rep_1806_c_30_15
Type: TC
Location: 16822 - 18195 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List