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Cluster: Rep_1806_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1806_c_23 Rep_1806_c_23_10 12287 14230 - 2.A.67.4.3
TC Rep_1806_c_23 Rep_1806_c_23_11 14536 16311 + 2.A.21.3.2
NULL(UNKNOWN) Rep_1806_c_23 Rep_1806_c_23_12 16327 16641 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_1806_c_23 Rep_1806_c_23_13 16794 17912 + APH
CAZyme Rep_1806_c_23 Rep_1806_c_23_14 18015 19721 + GH136
sulfatase Rep_1806_c_23 Rep_1806_c_23_15 19956 20900 + S1_46
TC Rep_1806_c_23 Rep_1806_c_23_16 20900 22297 + 2.A.1.3.37
TF Rep_1806_c_23 Rep_1806_c_23_17 22329 23321 + LacI
STP Rep_1806_c_23 Rep_1806_c_23_18 23349 24320 + PfkB
TC Rep_1806_c_23 Rep_1806_c_23_19 24759 25511 + 2.A.89.3.2
Gene ID: Rep_1806_c_23_10
Type: TC
Location: 12287 - 14230 (-)
Gene ID: Rep_1806_c_23_11
Type: TC
Location: 14536 - 16311 (+)
Gene ID: Rep_1806_c_23_12
Type:
Location: 16327 - 16641 (+)
Gene ID: Rep_1806_c_23_13
Type: pfam
Location: 16794 - 17912 (+)
Gene ID: Rep_1806_c_23_14
Type: CAZyme
Location: 18015 - 19721 (+)
Gene ID: Rep_1806_c_23_15
Type: sulfatase
Location: 19956 - 20900 (+)
Gene ID: Rep_1806_c_23_16
Type: TC
Location: 20900 - 22297 (+)
Gene ID: Rep_1806_c_23_17
Type: TF
Location: 22329 - 23321 (+)
Gene ID: Rep_1806_c_23_18
Type: STP
Location: 23349 - 24320 (+)
Gene ID: Rep_1806_c_23_19
Type: TC
Location: 24759 - 25511 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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